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01/22/2009 18:00

Efficient working in confined spaces: New insights into the architecture of cellular protein factories

Eva-Maria Diehl Öffentlichkeitsarbeit
Max-Planck-Institut für Biochemie

    Each cell in an organism possesses its own protein factories known as ribosomes. Every second, these enzyme complexes produce new proteins with messenger molecules (mRNA) from the cell nucleus as blueprints. In order to generate as many proteins as possible at the same time, several ribosomes cluster together to form an "industrial complex" - the polysome - and read simultaneously the same messenger molecule. Scientists at the Max-Planck-Institute of Biochemistry have now, for the first time, been able to reveal the three-dimensional structure of these complexes (Cell 23.1.2009).

    In a polysome, the ribosomes are densely packed and exhibit preferred orientations: The small ribosomal subunits are orientated towards the inside of the polysome and the ribosomes are arranged either in a staggered or in a pseudo-helical structure (see figure). This arrangement ensures that the distance between nascent protein chains is maximized, thereby reducing the probability of intermolecular interactions that would give rise to aggregation and limit productive folding. Until now, the belief has been that specialised proteins, the so-called chaperones, would prevent protein misfolding. Against the background of the new findings, their function appears in a new light: "It appears possible that the main function of chaperones that interact with nascent polypeptide chains is not to suppress chain aggregation within polysomes, but rather to reduce intra-chain misfolding as well as aggregation between different polysomes in the crowded cellular environment", explains Ulrich Hartl, head of the "Cellular Biochemistry" department, who lead the project in cooperation with Wolfgang Baumeister, head of the "Molecular Structural Biology" department. Moreover, the spatial structure of the polysome enables the ribosomes to process the messenger molecule in the protected area within the polysome and to pass it on without detours. Thus, the architecture of the cellular protein factories facilitates an optimized work flow and increases the efficiency of protein folding.

    Original Publication:

    The Native 3D Organization of Bacterial Polysomes; Florian Brandt, Adrian H. Elcock, Stephanie A. Etchells, Julio O. Ortiz, F. Ulrich Hartl and Wolfgang Baumeister;
    Cell, DOI 10.1016/j.cell.2008.11.016

    Contact:

    Florian Brandt
    Max-Planck Institut für Biochemie
    Am Klopferspitz 18
    D-82152 Martinsried
    Germany
    mail: fbrandt@biochem.mpg.de

    Dr. Monika Gödde
    Public Relations
    Max-Planck-Institut für Biochemie
    Am Klopferspitz 18
    82152 Martinsried
    phone: 089 - 8578 3882
    mail: goedde@biochem.mpg.de


    More information:

    http://www.biochem.mpg.de/baumeister - Abteilung Molekulare Strukturbiologie
    http://www.biochem.mpg.de/hartl - Abteilung Zelluläre Biochemie
    http://www.biochem.mpg.de - Max-Planck-Institut für Biochemie


    Images

    Figure: The three dimensional strucuture of the polysome:Cryoelectron tomographic picture of two polysomes (left), schematic diagram of their structure (middle) and the messenger molecule (mRNA) pathway within the polysome (right). The small ribosomal subunits (yellow) are oriented towards the inside of the polysome, the large subunits (blue) and the nascent protein chains (indicated by red cones) face the cytosol. If the ribosomes are continuously arranged in a "top-to-top" orientation (Fig. A, middle), the result is a pseudo-helical structure of the polysome. If the ribosomes are arranged alternating in "top-to-top" and in "top-to-bottom" orientation (Fig. B, middle), the result is a staggered structure. In both cases the mRNA traverses the shortest possible path from one ribosome to its next neighbor (Fig A and B, right).
    Figure: The three dimensional strucuture of the polysome:Cryoelectron tomographic picture of two pol ...
    Source: Florian Brandt, Max-Planck-Institut für Biochemie


    Criteria of this press release:
    Biology, Chemistry, Medicine
    transregional, national
    Research results, Scientific Publications
    English


     

    Figure: The three dimensional strucuture of the polysome:Cryoelectron tomographic picture of two polysomes (left), schematic diagram of their structure (middle) and the messenger molecule (mRNA) pathway within the polysome (right). The small ribosomal subunits (yellow) are oriented towards the inside of the polysome, the large subunits (blue) and the nascent protein chains (indicated by red cones) face the cytosol. If the ribosomes are continuously arranged in a "top-to-top" orientation (Fig. A, middle), the result is a pseudo-helical structure of the polysome. If the ribosomes are arranged alternating in "top-to-top" and in "top-to-bottom" orientation (Fig. B, middle), the result is a staggered structure. In both cases the mRNA traverses the shortest possible path from one ribosome to its next neighbor (Fig A and B, right).


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